MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-05_task-train_run-1_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0013026050420168068
aqi0.006536417016806723
dummy_trs0
dvarsnstd29.310984374050637
dvarsstd1.192891227426161
dvarsvstd0.9794722345147685
efc0.5779696066571822
fber382.5375671386719
fdmean0.1647277868736171
fdnum56
fdperc23.529411764705884
fwhmavg2.788748484848485
fwhmx2.579592
fwhmy2.903228
fwhmz2.8834254545454545
gcor0.0174844
gsrx-0.010168914683163166
gsry0.08622188866138458
sizet238
sizex76
sizey76
sizez54
snr2.9241592062068733
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk22.455717340960756
summarybgmad111.71223115089262
summarybgmean577.0816040039062
summarybgmedian290.0252380371094
summarybgn185641.0
summarybgp05202.54202270507812
summarybgp952029.668212890625
summarybgstdv774.263427734375
summaryfgk0.7002698954415081
summaryfgmad1843.7371164615206
summaryfgmean6056.60205078125
summaryfgmedian5746.0673828125
summaryfgn69470.0
summaryfgp053446.0052734375004
summaryfgp959792.850292968753
summaryfgstdv1965.0181884765625
tsnr54.74111440079287
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime13:56:39.837500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.993098, 0.111433, -0.0365972, -0.11192, 0.99365, -0.011552]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.096943
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber8
ShimSetting[-5640, -1571, 3171, 444, -61, -45, -36, 10]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp226.358
WipMemBlockc6d0fb49-9374-4ee3-943b-32ffe163c471||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum633ac4fccd58ce22e35dbb4f67e728e8
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.