MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-05_task-test_run-2_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.006710187265917604
aqi0.011457621385767792
dummy_trs1
dvarsnstd30.77198624436091
dvarsstd1.0926218426691727
dvarsvstd0.9593659997744365
efc0.5818261609472442
fber364.9589538574219
fdmean0.22554807776165262
fdnum90
fdperc33.70786516853933
fwhmavg2.7143815757575758
fwhmx2.51336
fwhmy2.844512
fwhmz2.7852727272727273
gcor0.0234034
gsrx-0.009933716617524624
gsry0.08672753721475601
sizet267
sizex76
sizey76
sizez54
snr2.998017814657991
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk20.064814775018945
summarybgmad119.54383033010595
summarybgmean590.5264892578125
summarybgmedian295.8895263671875
summarybgn185066.0
summarybgp05201.37828063964844
summarybgp952113.665771484375
summarybgstdv775.11865234375
summaryfgk0.6676175979614194
summaryfgmad1794.2599729435153
summaryfgmean5973.46923828125
summaryfgmedian5680.1142578125
summaryfgn69494.0
summaryfgp053438.0380249023438
summaryfgp959535.453857421873
summaryfgstdv1894.609619140625
tsnr33.95911936601624
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:51:36.957500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.991546, 0.0967947, -0.0864107, -0.0987947, 0.994923, -0.0191669]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0969801
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber20
ShimSetting[-5652, -1572, 3164, 444, -52, -55, -16, 14]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp226.358
WipMemBlock975c8367-eead-4749-89cc-2a1e8100abe6||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum03a3628781b2f570e91f59f298dd76fb
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.