MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-04_task-train_run-4_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0021810126582278476
aqi0.0056539019409282704
dummy_trs1
dvarsnstd32.35587228334748
dvarsstd1.2369896716101692
dvarsvstd0.9994464349576266
efc0.5781541011900769
fber345.4835510253906
fdmean0.1902191919392443
fdnum73
fdperc30.80168776371308
fwhmavg2.9038744242424244
fwhmx2.697868
fwhmy3.010508
fwhmz3.0032472727272723
gcor0.0206153
gsrx-0.012389524839818478
gsry0.08690421283245087
sizet237
sizex76
sizey76
sizez54
snr2.6130384387870556
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk16.944345606291023
summarybgmad136.68087591652062
summarybgmean643.1090698242188
summarybgmedian317.4345703125
summarybgn184778.0
summarybgp05212.3037872314453
summarybgp952329.213061523437
summarybgstdv842.3090209960938
summaryfgk0.9251515534863546
summaryfgmad2120.2746449582855
summaryfgmean6443.943359375
summaryfgmedian6030.22119140625
summaryfgn70156.0
summaryfgp053480.4354858398438
summaryfgp9510887.198486328125
summaryfgstdv2307.7265625
tsnr54.57398044038564
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:18:34.862500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990611, 0.0827471, -0.108822, -0.0786587, 0.996044, 0.0413477]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100722
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber12
ShimSetting[-5650, -1575, 3183, 472, -30, 0, 23, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp228.63
WipMemBlockd8ba61d7-0b88-4a80-826d-bec2f56b5d12||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum876584f0e0e07e7f655da9f93ead60a8
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.