MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-04_task-train_run-2_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0010222784810126583
aqi0.004604193164556962
dummy_trs1
dvarsnstd30.072605173093223
dvarsstd1.2493132945338974
dvarsvstd0.9997510084322031
efc0.5770994863465835
fber354.0145568847656
fdmean0.15335112017333546
fdnum46
fdperc19.40928270042194
fwhmavg2.8865663030303033
fwhmx2.675764
fwhmy2.9968440000000003
fwhmz2.987090909090909
gcor0.0322227
gsrx-0.010648336261510849
gsry0.08912238478660583
sizet237
sizex76
sizey76
sizez54
snr2.64370216571801
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk16.632259320685744
summarybgmad132.55214002653423
summarybgmean636.7447509765625
summarybgmedian312.6033630371094
summarybgn185828.0
summarybgp05211.32489013671875
summarybgp952317.943041992186
summarybgstdv837.89794921875
summaryfgk0.8743941014202461
summaryfgmad2076.5595973183054
summaryfgmean6376.60791015625
summaryfgmedian5977.55859375
summaryfgn69846.0
summaryfgp053470.3712158203125
summaryfgp9510734.94873046875
summaryfgstdv2261.039794921875
tsnr61.97977867210284
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:54:43.642500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990611, 0.0827471, -0.108822, -0.0786587, 0.996044, 0.0413477]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100722
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber9
ShimSetting[-5650, -1575, 3183, 472, -30, 0, 23, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.0275, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.54, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.0275, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.54, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp228.63
WipMemBlockd11a843b-016e-4bdb-be75-13c508f24d37||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumedd7d30b66e9e3122f1d8af4d5a267f7
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.