MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-04_task-train_run-10_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0006673529411764706
aqi0.0026641672268907565
dummy_trs0
dvarsnstd29.577419940759487
dvarsstd1.2795610702953595
dvarsvstd1.0021028512658228
efc0.5798053255316835
fber332.43170166015625
fdmean0.12884767894754637
fdnum34
fdperc14.285714285714286
fwhmavg2.9290372121212123
fwhmx2.720984
fwhmy3.072724
fwhmz2.9934036363636363
gcor0.0143556
gsrx-0.014739947393536568
gsry0.08383888751268387
sizet238
sizex76
sizey76
sizez54
snr2.5949071407476216
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk15.209997480461404
summarybgmad145.60648694700214
summarybgmean676.4949951171875
summarybgmedian330.0966491699219
summarybgn184445.0
summarybgp05218.75210571289062
summarybgp952507.5673339843725
summarybgstdv887.8413696289062
summaryfgk0.9198569920670057
summaryfgmad2216.7335560923484
summaryfgmean6564.982421875
summaryfgmedian6151.98779296875
summaryfgn70065.0
summaryfgp053501.95234375
summaryfgp9511072.921093750001
summaryfgstdv2370.776123046875
tsnr71.27232447406277
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:04:21.647500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990611, 0.0827471, -0.108822, -0.0786587, 0.996044, 0.0413477]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100722
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber18
ShimSetting[-5650, -1575, 3183, 472, -30, 0, 23, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp228.63
WipMemBlock19a25532-0066-4727-9e53-c4f1a8061732||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum797bd23cf6ad21169c08c1e3190b3d0d
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.