MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-04_task-test_run-1_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.003992014925373134
aqi0.0068384858582089545
dummy_trs0
dvarsnstd32.91743402831459
dvarsstd1.257533186441948
dvarsvstd1.0191922129962543
efc0.5762742888478901
fber356.6484680175781
fdmean0.1949229573660345
fdnum88
fdperc32.83582089552239
fwhmavg2.8779463030303027
fwhmx2.681492
fwhmy3.009856
fwhmz2.9424909090909095
gcor0.0299525
gsrx-0.011109618470072746
gsry0.08817316591739655
sizet268
sizex76
sizey76
sizez54
snr2.6366252995174517
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk17.688040456456932
summarybgmad135.7991556182684
summarybgmean620.621826171875
summarybgmedian311.1305847167969
summarybgn185034.0
summarybgp05203.25
summarybgp952226.1233154296874
summarybgstdv808.8359375
summaryfgk0.9706170401909628
summaryfgmad2075.122602492264
summaryfgmean6360.13818359375
summaryfgmedian5955.033203125
summaryfgn70141.0
summaryfgp053476.373046875
summaryfgp9510703.201171875
summaryfgstdv2258.5654296875
tsnr48.11433664546348
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:45:59.242500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990611, 0.0827471, -0.108822, -0.0786587, 0.996044, 0.0413477]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100761
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber8
ShimSetting[-5650, -1575, 3183, 472, -30, 0, 23, -3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp228.63
WipMemBlock7a88ce64-8a65-45fa-bf00-5f542b477fa9||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum36b7fc3a984838464e84a6159091ff13
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.