MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-03_task-train_run-7_bold.
  • Date and time: 2021-02-08, 02:02.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005779237288135592
aqi0.0022725630932203386
dummy_trs2
dvarsnstd27.511452118595752
dvarsstd1.222780960212765
dvarsvstd0.9905176351063826
efc0.5786951446254639
fber365.7985534667969
fdmean0.1316504152760791
fdnum42
fdperc17.796610169491526
fwhmavg2.816112529832054
fwhmx2.5974922477161644
fwhmy2.957216
fwhmz2.8936293417799988
gcor0.00755367
gsrx-0.01289887074381113
gsry0.07837089151144028
sizet236
sizex76
sizey76
sizez54
snr2.76569844053719
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.749999761581421
summarybgk18.231151811028717
summarybgmad120.88861497178146
summarybgmean627.5272216796875
summarybgmedian308.52117919921875
summarybgn184715.0
summarybgp05213.96609497070312
summarybgp952305.4042480468734
summarybgstdv835.698486328125
summaryfgk0.6790953320157542
summaryfgmad2058.040462233979
summaryfgmean6370.07958984375
summaryfgmedian6015.423828125
summaryfgn69584.0
summaryfgp053499.1868774414065
summaryfgp9510475.473437499999
summaryfgstdv2174.9951171875
tsnr74.47769511805382
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:13:44.205000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.99733, 0.0365272, -0.0632292, -0.0356989, 0.999262, 0.0141807]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100112
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber15
ShimSetting[-5636, -1569, 3188, 490, -49, -11, -31, -29]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp227.178
WipMemBlock37251cd9-9d63-403e-a3e2-54e9dbab7340||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum884752da1406803856ac1f1c3d09a207
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.