MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-03_task-train_run-10_bold.
  • Date and time: 2021-02-08, 00:59.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005121518987341773
aqi0.001982666371308017
dummy_trs1
dvarsnstd26.72980009521188
dvarsstd1.2378072658050852
dvarsvstd1.0000325661864415
efc0.5790682804123521
fber362.4716796875
fdmean0.11181639331343901
fdnum18
fdperc7.594936708860759
fwhmavg2.820184045186816
fwhmx2.6170362495800257
fwhmy2.964352
fwhmz2.879163885980423
gcor0.00792665
gsrx-0.01171797700226307
gsry0.07850634306669235
sizet237
sizex76
sizey76
sizez54
snr2.752238263809697
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.749999761581421
summarybgk16.202050402422742
summarybgmad125.44564409298042
summarybgmean650.756103515625
summarybgmedian313.1898498535156
summarybgn185853.0
summarybgp05215.82276916503906
summarybgp952451.78984375
summarybgstdv868.2345581054688
summaryfgk0.692087632534387
summaryfgmad2089.5149924854813
summaryfgmean6400.3310546875
summaryfgmedian6045.8837890625
summaryfgn69536.0
summaryfgp053492.2868041992188
summaryfgp9510540.20947265625
summaryfgstdv2196.699462890625
tsnr78.53902970440686
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:44:56.597500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.99733, 0.0365272, -0.0632292, -0.0356989, 0.999262, 0.0141807]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.100112
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber19
ShimSetting[-5636, -1569, 3188, 490, -49, -11, -31, -29]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp227.178
WipMemBlockb09ae0aa-7146-481c-baa9-78ee1cb51dfc||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum36bb577274555fd41e5d4ce68be772e0
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.