MRIQC: individual bold report

Summary

  • BIDS filename: sub-10_ses-02_task-train_run-6_bold.
  • Date and time: 2021-02-08, 02:34.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0025846413502109704
aqi0.009221000759493671
dummy_trs1
dvarsnstd29.87853671724577
dvarsstd1.1042009914830515
dvarsvstd0.9418096128813566
efc0.5790831049402809
fber373.2148132324219
fdmean0.1833361881790842
fdnum61
fdperc25.738396624472575
fwhmavg2.706474181818182
fwhmx2.4898759999999998
fwhmy2.854292
fwhmz2.7752545454545454
gcor0.0127265
gsrx-0.0011317929020151496
gsry0.07485707104206085
sizet237
sizex76
sizey76
sizez54
snr2.9837492601968063
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk23.43627657190682
summarybgmad105.20218308554712
summarybgmean531.8433837890625
summarybgmedian281.5442810058594
summarybgn184528.0
summarybgp05196.53585815429688
summarybgp951816.8927429199218
summarybgstdv676.6060791015625
summaryfgk0.8346317161127415
summaryfgmad1696.8918096676348
summaryfgmean5811.40380859375
summaryfgmedian5517.0712890625
summaryfgn69827.0
summaryfgp053376.94326171875
summaryfgp959331.8974609375
summaryfgstdv1849.026611328125
tsnr43.74631918082014
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:59:35.070000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998383, 0.0350019, -0.044791, -0.037307, 0.997965, -0.0517058]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0931256
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber13
ShimSetting[-5618, -1492, 3128, 466, 10, 109, -72, -44]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp222.37
WipMemBlock74642ffc-906a-48fc-8955-0227dde2abb7||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum2f2420bb6e7ea8a547d35f6d8156a665
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.