MRIQC: individual T2w report

cjv			0.5827122817110608
cnr			2.3355136426632135
efc			0.4155053051437832
fber			4086.662262240929
fwhm	avg		2.554612402386725
fwhm	x		2.46199
fwhm	y		2.87805
fwhm	z		2.3237972071601747
icvs	csf		0.17329764348079757
icvs	gm		0.40045592360641896
icvs	wm		0.42624643291278347
inu	med		1.633442759513855
inu	range		0.3270031094551087
qi	1		0.0
qi	2		0.0053168403323328745
rpve	csf		26.85048620278842
rpve	gm		12.512215167191131
rpve	wm		13.710167722661602
size	x		256
size	y		256
size	z		128
snr	csf		3.7584653592634245
snr	gm		9.116943161565661
snr	total		7.194412257468369
snr	wm		8.707828251576021
snrd	csf		321.1096637438486
snrd	gm		94.49744901796497
snrd	total		160.08976389312386
snrd	wm		64.66217891755795
spacing	x		1.0
spacing	y		1.0
spacing	z		1.2099980115890503
summary	bg	k	15.484579514092847
summary	bg	mad	10.130395710336023
summary	bg	mean	17.37305316099859
summary	bg	median	13.918764591217041
summary	bg	n	2519230.0
summary	bg	p05	3.5429582595825195
summary	bg	p95	40.744019985198975
summary	bg	stdv	12.220895359436373
summary	csf	k	0.2561460212988913
summary	csf	mad	1536.4433494009636
summary	csf	mean	4949.458654940744
summary	csf	median	4965.329466581345
summary	csf	n	21015.0
summary	csf	p05	2481.1716294527055
summary	csf	p95	6606.895909047127
summary	csf	stdv	1321.0741227645453
summary	gm	k	0.15325859158129207
summary	gm	mad	157.39633335133192
summary	gm	mean	1465.3583034824512
summary	gm	median	1461.2172136306763
summary	gm	n	11430.0
summary	gm	p05	1212.0586740255358
summary	gm	p95	1736.6822183132172
summary	gm	stdv	160.26789528855036
summary	wm	k	0.20990117789504525
summary	wm	mad	111.43435281369625
summary	wm	mean	995.6403551680427
summary	wm	median	999.8734345436096
summary	wm	n	134406.0
summary	wm	p05	799.4432244300842
summary	wm	p95	1176.894813299179
summary	wm	stdv	114.82423470565553
tpm	overlap	csf	0.15075261890888214
tpm	overlap	gm	0.40262019634246826
tpm	overlap	wm	0.46842923760414124
wm2max			0.15766790374715672

AcquisitionMatrixPE	256
AcquisitionNumber	1
AcquisitionTime	14:32:14.092500
BaseResolution	256
BodyPartExamined	BRAIN
ConsistencyInfo	N4_VE11C_LATEST_20160120
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20201102
DeviceSerialNumber	167012
DwellTime	5.4e-06
EchoTime	0.12
EchoTrainLength	28
FlipAngle	90
ImageOrientationPatientDICOM	[0.996866, 0.0316337, -0.0725144, -0.0287156, 0.998749, 0.0409375]
ImageType	['ORIGINAL', 'PRIMARY', 'M', 'NORM', 'DIS2D']
ImagingFrequency	123.253
InPlanePhaseEncodingDirectionDICOM	COL
InstitutionAddress	Vassar Street 43,Cambridge,Boston,US,02139
InstitutionName	McGovern Institute for Brain Research (3T1)
InstitutionalDepartmentName	Department
MRAcquisitionType	2D
MagneticFieldStrength	3
Manufacturer	Siemens
ManufacturersModelName	Prisma_fit
Modality	MR
ParallelReductionFactorInPlane	2
PartialFourier	1
PatientPosition	HFS
PercentPhaseFOV	100
PercentSampling	100
PhaseEncodingDirection	j-
PhaseEncodingSteps	255
PhaseResolution	1
PixelBandwidth	360
ProcedureStepDescription	Oliva^Alex Ben
ProtocolName	t2w_1x1x1
PulseSequenceDetails	%SiemensSeq%\tse
ReceiveCoilActiveElements	HEA;HEP
ReceiveCoilName	Head_32
ReconMatrixPE	256
RefLinesPE	24
RepetitionTime	7.97
SAR	0.33845
ScanningSequence	SE
SequenceName	*tseR2d1_28
SequenceVariant	SK\SP
SeriesDescription	t2w_1x1x1
SeriesNumber	9
ShimSetting	[-5633, -1564, 3172, 384, -6, -127, -50, -11]
SliceThickness	1.1
SliceTiming	[0, 47.8125, 95.6406, 103.453, 151.281, 0.29688, 48.125, 95.9375, 103.781, 151.594, 0.60938, 48.4375, 96.25, 104.094, 151.922, 0.92188, 48.7344, 96.5625, 104.406, 152.234, 1.21875, 49.0469, 96.8594, 104.734, 152.547, 1.53125, 49.3438, 97.1719, 105.047, 152.875, 1.84375, 49.6562, 97.4688, 105.375, 153.188, 2.14062, 49.9688, 97.7812, 105.688, 153.516, 2.45312, 50.2656, 98.0938, 106.016, 153.828, 2.75, 50.5781, 98.3906, 106.328, 154.141, 3.0625, 50.8906, 98.7031, 106.641, 154.469, 3.375, 51.1875, 99.0156, 106.969, 154.781, 3.67188, 51.5, 99.3125, 107.281, 155.109, 3.98438, 51.7969, 99.625, 107.594, 155.422, 4.28125, 52.1094, 99.9219, 107.922, 155.734, 4.59375, 52.4219, 60.2344, 108.234, 156.062, 4.90625, 52.7188, 60.5469, 108.562, 156.375, 5.20312, 53.0312, 60.8438, 108.875, 156.703, 5.51562, 53.3438, 61.1562, 109.203, 157.016, 5.82812, 53.6406, 61.4688, 109.516, 157.344, 6.125, 53.9531, 61.7656, 109.828, 157.656, 6.4375, 54.25, 62.0781, 110.156, 157.969, 6.73438, 54.5625, 62.375, 110.469, 158.297, 7.04688, 54.875, 62.6875, 110.797, 158.609, 7.35938, 55.1719, 63, 111.109, 158.922, 7.65625, 55.4844, 63.2969]
SoftwareVersions	syngo MR E11
SpacingBetweenSlices	1.21
StationName	MRC35115
TxRefAmp	221.201

md5sum	f3e2294af7872f687140691ce78d85f3
software	mriqc
version	0.16.1

MRIQC: individual T2w report

Summary

Visual reports

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