MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-05_task-train_run-1_bold.
  • Date and time: 2021-02-08, 03:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007053164556962024
aqi0.0028581000843881854
dummy_trs1
dvarsnstd27.858593738940684
dvarsstd1.219756886652542
dvarsvstd1.001046941313559
efc0.6087860681721436
fber266.3907165527344
fdmean0.09250336933106419
fdnum2
fdperc0.8438818565400844
fwhmavg2.6975670303030306
fwhmx2.483824
fwhmy2.847528
fwhmz2.761349090909091
gcor0.0134227
gsrx0.003209556918591261
gsry0.10279615968465805
sizet237
sizex76
sizey76
sizez54
snr2.675027712308015
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk20.03152406470548
summarybgmad151.8103252600194
summarybgmean693.7340698242188
summarybgmedian325.2025146484375
summarybgn174924.0
summarybgp05208.05062866210938
summarybgp952536.1515747070316
summarybgstdv953.5111694335938
summaryfgk0.8310073390349584
summaryfgmad1904.154966682785
summaryfgmean5856.9794921875
summaryfgmedian5487.8603515625
summaryfgn73998.0
summaryfgp053244.777880859375
summaryfgp959805.317626953125
summaryfgstdv2051.50146484375
tsnr68.32026871480048
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime13:50:49.447500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999535, 0.0290685, 0.00922085, -0.02565, 0.964898, -0.261368]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.097389
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber7
ShimSetting[-5626, -1488, 3135, 440, -88, 120, -188, 1]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp235.457
WipMemBlock45a6e4f6-635a-4451-91d6-ae4f1ce11604||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum36c60121fdb258d1c36e039f7b947c23
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.