MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-05_task-test_run-2_bold.
  • Date and time: 2021-02-08, 03:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005419776119402985
aqi0.002775241865671642
dummy_trs0
dvarsnstd27.99683645149811
dvarsstd1.207125164269662
dvarsvstd0.9949922362921347
efc0.6130962391944228
fber248.96875
fdmean0.09798040433407902
fdnum1
fdperc0.373134328358209
fwhmavg2.6899629090909087
fwhmx2.487332
fwhmy2.828484
fwhmz2.7540727272727272
gcor0.0192993
gsrx0.0020258903969079256
gsry0.10376717895269394
sizet268
sizex76
sizey76
sizez54
snr2.665000848122959
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk18.78874316025014
summarybgmad163.92156514639657
summarybgmean728.26611328125
summarybgmedian338.03729248046875
summarybgn174089.0
summarybgp05211.75521850585938
summarybgp952644.0804687500013
summarybgstdv991.8154907226562
summaryfgk0.8665757471501525
summaryfgmad1925.358060617263
summaryfgmean5902.71142578125
summaryfgmedian5525.0634765625
summaryfgn74261.0
summaryfgp053266.615478515625
summaryfgp959901.3466796875
summaryfgstdv2073.179931640625
tsnr69.24492342956364
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:30:8.447500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999535, 0.0290685, 0.00922085, -0.02565, 0.964898, -0.261368]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0974263
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber12
ShimSetting[-5626, -1488, 3135, 440, -88, 120, -188, 1]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp235.457
WipMemBlock0351652a-5d19-4e36-861f-97b9d5c818fc||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum993a682d53a0829cd3af78ff7330720d
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.