MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-04_task-train_run-9_bold.
  • Date and time: 2021-02-08, 03:43.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.002549915254237288
aqi0.002565215889830508
dummy_trs2
dvarsnstd27.78310533051064
dvarsstd1.233463776255319
dvarsvstd1.026842496553192
efc0.6163005488116271
fber238.45867919921875
fdmean0.09371229047948341
fdnum5
fdperc2.1186440677966103
fwhmavg2.6922882424242425
fwhmx2.4712240000000003
fwhmy2.857888
fwhmz2.7477527272727276
gcor0.0128823
gsrx0.002048736670985818
gsry0.10229771584272385
sizet236
sizex76
sizey76
sizez54
snr2.660440991436921
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk16.74538215489271
summarybgmad177.50707078098026
summarybgmean769.8568725585938
summarybgmedian353.45550537109375
summarybgn173636.0
summarybgp05217.16525268554688
summarybgp952825.4099731445312
summarybgstdv1036.6724853515625
summaryfgk0.6318957650411616
summaryfgmad2030.1975110982642
summaryfgmean6048.28125
summaryfgmedian5681.89404296875
summaryfgn73960.0
summaryfgp053285.773681640625
summaryfgp9510130.008398437501
summaryfgstdv2135.681884765625
tsnr68.4918666491285
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:11:54.310000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999548, 0.0295417, 0.00554893, -0.0272215, 0.967943, -0.249689]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0954093
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber18
ShimSetting[-5625, -1494, 3145, 430, -66, 93, -174, 2]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp232.12
WipMemBlock6a5ff0cf-03c1-4dac-9440-e040f52b09ba||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum5c5a9b6709f2d7817e1ebbdea4e9d046
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.