MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-04_task-train_run-3_bold.
  • Date and time: 2021-02-08, 04:12.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0014163291139240506
aqi0.0027782301265822785
dummy_trs1
dvarsnstd27.692730943983054
dvarsstd1.2491672966525418
dvarsvstd1.0201752280932206
efc0.6118903035868264
fber255.2107391357422
fdmean0.09025790183390485
fdnum1
fdperc0.4219409282700422
fwhmavg2.729950181818182
fwhmx2.520728
fwhmy2.878628
fwhmz2.790494545454546
gcor0.0176354
gsrx0.00039402898983098567
gsry0.10202638059854507
sizet237
sizex76
sizey76
sizez54
snr2.655103157714349
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk18.3277838377023
summarybgmad167.95628103485538
summarybgmean742.4760131835938
summarybgmedian343.70672607421875
summarybgn173970.0
summarybgp05214.40695495605468
summarybgp952716.060607910153
summarybgstdv1011.979736328125
summaryfgk0.7061368012206404
summaryfgmad2033.7422189903114
summaryfgmean6076.8046875
summaryfgmedian5703.56494140625
summaryfgn74243.0
summaryfgp053313.3597412109375
summaryfgp9510182.73544921875
summaryfgstdv2148.137451171875
tsnr70.82804649462923
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:08:51.842500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999548, 0.0295417, 0.00554893, -0.0272215, 0.967943, -0.249689]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0954093
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber10
ShimSetting[-5625, -1494, 3145, 430, -66, 93, -174, 2]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp232.12
WipMemBlock98f40ca2-b006-4629-b01a-510d0b49a1c7||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb322fb74a8054c5ae5d2846f97295012
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.