MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-04_task-train_run-10_bold.
  • Date and time: 2021-02-08, 03:43.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0008574261603375526
aqi0.0025816146413502107
dummy_trs1
dvarsnstd27.690753823601693
dvarsstd1.2092028421186443
dvarsvstd1.0043076296186442
efc0.6160827768419134
fber237.9474639892578
fdmean0.09106206832697568
fdnum0
fdperc0.0
fwhmavg2.6922174545454545
fwhmx2.48678
fwhmy2.840716
fwhmz2.7491563636363634
gcor0.0152575
gsrx0.0032074288465082645
gsry0.10150337219238281
sizet237
sizex76
sizey76
sizez54
snr2.656479457301765
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk16.78157074902238
summarybgmad178.90378586382673
summarybgmean772.2205810546875
summarybgmedian354.37127685546875
summarybgn174146.0
summarybgp05215.92825317382812
summarybgp952841.1718139648438
summarybgstdv1041.224365234375
summaryfgk0.6460819174981638
summaryfgmad2027.9428408787644
summaryfgmean6040.23974609375
summaryfgmedian5673.43408203125
summaryfgn73913.0
summaryfgp053279.5086914062504
summaryfgp9510111.613085937497
summaryfgstdv2135.68212890625
tsnr68.95522938109934
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:19:32.370000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999548, 0.0295417, 0.00554893, -0.0272215, 0.967943, -0.249689]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0954093
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber19
ShimSetting[-5625, -1494, 3145, 430, -66, 93, -174, 2]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp232.12
WipMemBlock5f149b80-14d2-49c3-887a-4d727617f80d||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb2c945daff32e4a0c6a4bc88df76729d
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.