MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-03_task-train_run-6_bold.
  • Date and time: 2021-02-08, 04:38.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.001871772151898734
aqi0.0048643918565400845
dummy_trs1
dvarsnstd30.00087173118644
dvarsstd1.1686925086440676
dvarsvstd0.9792105729661015
efc0.6143545617119027
fber244.8328399658203
fdmean0.1433860688015132
fdnum31
fdperc13.080168776371307
fwhmavg2.7081627878787877
fwhmx2.4965599999999997
fwhmy2.868852
fwhmz2.7590763636363635
gcor0.0192233
gsrx-0.0010447188979014754
gsry0.10614494234323502
sizet237
sizex76
sizey76
sizez54
snr2.664638682938655
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk19.468812136924797
summarybgmad172.288372505624
summarybgmean742.0856323242188
summarybgmedian344.43035888671875
summarybgn173787.0
summarybgp05211.10546875
summarybgp952679.680371093747
summarybgstdv1015.752685546875
summaryfgk0.7984055194150272
summaryfgmad1964.191669409888
summaryfgmean5967.65380859375
summaryfgmedian5592.36669921875
summaryfgn74403.0
summaryfgp053279.438330078125
summaryfgp9510006.81142578125
summaryfgstdv2098.719482421875
tsnr58.12698051589541
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:20:28.392500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999671, 0.0182817, 0.0179981, -0.0134354, 0.970733, -0.239785]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.101113
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber12
ShimSetting[-5616, -1486, 3151, 463, -38, 147, -187, -11]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp236.806
WipMemBlockd881d667-12ea-47a2-ba5e-3d88446b20a9||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum8382be1f801d86cf6e6e7395156f473f
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.