MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-02_task-train_run-1_bold.
  • Date and time: 2021-02-08, 05:00.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007584453781512605
aqi0.002261162226890756
dummy_trs0
dvarsnstd26.789566933713058
dvarsstd1.243237951814346
dvarsvstd1.0091682656962029
efc0.6055230133393708
fber278.46533203125
fdmean0.08069168336418032
fdnum0
fdperc0.0
fwhmavg2.7031534545454545
fwhmx2.519776
fwhmy2.8514880000000002
fwhmz2.7381963636363635
gcor0.0139106
gsrx0.005644988268613815
gsry0.09208261966705322
sizet238
sizex76
sizey76
sizez54
snr2.6408881625902745
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk19.094228538900932
summarybgmad162.9554168775715
summarybgmean730.2059326171875
summarybgmedian340.08404541015625
summarybgn175153.0
summarybgp05214.60084533691406
summarybgp952662.900097656247
summarybgstdv994.371337890625
summaryfgk0.6279388952837741
summaryfgmad2140.839959325135
summaryfgmean6264.33447265625
summaryfgmedian5891.03369140625
summaryfgn73533.0
summaryfgp053386.122021484375
summaryfgp9510500.834765624999
summaryfgstdv2230.6865234375
tsnr74.83119546901435
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime13:46:7.437500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999645, 0.0265673, 0.00223055, -0.0258275, 0.98576, -0.166163]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0904544
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber7
ShimSetting[-5623, -1502, 3165, 460, -46, 123, -162, 3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp228.823
WipMemBlockdd3a8261-cf57-4903-8cc6-56934d8a21c5||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum896dea129fa1e6b4e7f39ae015c80116
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.