MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-02_task-train_run-10_bold.
  • Date and time: 2021-02-08, 04:38.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0006102953586497891
aqi0.002036011814345991
dummy_trs1
dvarsnstd26.77524459940678
dvarsstd1.2247760302966106
dvarsvstd1.0030421912288137
efc0.6147431785908938
fber243.0207061767578
fdmean0.07656200809979195
fdnum0
fdperc0.0
fwhmavg2.6828609696969696
fwhmx2.4770119999999998
fwhmy2.83724
fwhmz2.734330909090909
gcor0.0130291
gsrx0.005681624636054039
gsry0.09516684710979462
sizet237
sizex76
sizey76
sizez54
snr2.644935777327941
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk16.170900317766232
summarybgmad186.82665638475393
summarybgmean790.6270751953125
summarybgmedian364.71307373046875
summarybgn173656.0
summarybgp05221.3449249267578
summarybgp952908.8363037109375
summarybgstdv1051.431884765625
summaryfgk0.6374811706442847
summaryfgmad2151.4212363401675
summaryfgmean6299.44775390625
summaryfgmedian5929.15380859375
summaryfgn73838.0
summaryfgp053393.042321777344
summaryfgp9510549.060400390623
summaryfgstdv2241.685302734375
tsnr75.7035038494505
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:23:35.745000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999645, 0.0265673, 0.00223055, -0.0258275, 0.98576, -0.166163]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0904544
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber19
ShimSetting[-5623, -1502, 3165, 460, -46, 123, -162, 3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp228.823
WipMemBlockaa21a657-ed65-4bff-9814-1dd8214d79d8||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum87bcee88536e96fe44e8d51c3140ecb6
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.