MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-02_task-test_run-1_bold.
  • Date and time: 2021-02-08, 05:25.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0008758801498127342
aqi0.0022769513108614236
dummy_trs1
dvarsnstd26.545490071428585
dvarsstd1.2253376570676697
dvarsvstd1.0074232885714292
efc0.6117744718441288
fber252.851318359375
fdmean0.08464177253200289
fdnum0
fdperc0.0
fwhmavg2.7031110303030306
fwhmx2.505496
fwhmy2.865488
fwhmz2.738349090909091
gcor0.0148165
gsrx0.005920493509620428
gsry0.09541072696447372
sizet267
sizex76
sizey76
sizez54
snr2.634064491719081
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk17.359476213070533
summarybgmad179.322679357158
summarybgmean768.7747802734375
summarybgmedian354.9737854003906
summarybgn174233.0
summarybgp05216.6614227294922
summarybgp952816.74384765625
summarybgstdv1035.3094482421875
summaryfgk0.6156419319363864
summaryfgmad2136.18510958637
summaryfgmean6250.0556640625
summaryfgmedian5875.01123046875
summaryfgn73985.0
summaryfgp053357.16630859375
summaryfgp9510491.747460937502
summaryfgstdv2230.382568359375
tsnr74.02325579337776
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:27:38.407500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999645, 0.0265673, 0.00223055, -0.0258275, 0.98576, -0.166163]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0904891
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber12
ShimSetting[-5623, -1502, 3165, 460, -46, 123, -162, 3]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp228.823
WipMemBlock1ddae6c8-d7b0-4136-b1e5-46b59a13baa8||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum13a8ab8bf9b3f06cf816581e5ecf6cc9
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.