MRIQC: individual bold report

Summary

  • BIDS filename: sub-09_ses-01_task-localizer_run-5_bold.
  • Date and time: 2021-02-08, 05:54.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007724344569288389
aqi0.0024402350187265926
dummy_trs1
dvarsnstd28.071705180187994
dvarsstd1.2123943020676688
dvarsvstd1.0070780668796995
efc0.6159746165332488
fber236.44508361816406
fdmean0.10743012775893744
fdnum1
fdperc0.37453183520599254
fwhmavg2.711090787878788
fwhmx2.492476
fwhmy2.875
fwhmz2.7657963636363636
gcor0.0114204
gsrx0.0026141225825995207
gsry0.09480997920036316
sizet267
sizex76
sizey76
sizez54
snr2.6296914726469227
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk17.36306375049834
summarybgmad176.20753156833626
summarybgmean764.6597900390625
summarybgmedian353.7640380859375
summarybgn173292.0
summarybgp05218.4868927001953
summarybgp952775.430932617187
summarybgstdv1020.1568603515625
summaryfgk0.6417864232264336
summaryfgmad2043.4062806680167
summaryfgmean6050.55322265625
summaryfgmedian5676.228515625
summaryfgn74320.0
summaryfgp053267.6021606445315
summaryfgp9510191.841845703128
summaryfgstdv2158.50048828125
tsnr71.0222634114325
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:40:7.807500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999743, 0.0158547, -0.016229, -0.0188469, 0.978581, -0.204998]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_localizer_fMRI
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0973557
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_localizer_fMRI
SeriesNumber18
ShimSetting[-5623, -1499, 3151, 437, -58, 78, -170, 2]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNamelocalizer
TotalReadoutTime0.0382497
TxRefAmp234.295
WipMemBlock3a0d871b-8b2f-4163-acd8-d3caeb22aaa4||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum6c2cddaa878c99bc46e42fe3c3d965c8
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.