MRIQC: individual bold report

Summary

  • BIDS filename: sub-08_ses-03_task-train_run-4_bold.
  • Date and time: 2021-02-08, 07:06.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.003027596566523605
aqi0.004042688626609442
dummy_trs5
dvarsnstd27.74923949387932
dvarsstd1.1766194278448276
dvarsvstd1.0051120355172412
efc0.622069743652576
fber175.37889099121094
fdmean0.10964559832099012
fdnum12
fdperc5.150214592274678
fwhmavg2.938932328781876
fwhmx2.7165762590729003
fwhmy3.120468
fwhmz2.979752727272727
gcor0.0197706
gsrx0.02162773534655571
gsry0.11237630248069763
sizet233
sizex76
sizey76
sizez54
snr2.073671413536995
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk12.211927724463571
summarybgmad279.48006497383165
summarybgmean1103.34716796875
summarybgmedian460.4420471191406
summarybgn167062.0
summarybgp05246.07318191528321
summarybgp954419.7843017578125
summarybgstdv1559.40869140625
summaryfgk1.3898171933601242
summaryfgmad2781.81349227996
summaryfgmean7123.958984375
summaryfgmedian6429.9658203125
summaryfgn78743.0
summaryfgp053384.6432861328126
summaryfgp9513085.899414062498
summaryfgstdv3100.744384765625
tsnr60.58902753400616
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:45:5.340000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998209, 0.00216109, -0.0597845, -0.00331023, 0.999812, -0.019129]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.137555
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber12
ShimSetting[-5635, -1556, 3251, 466, -37, 26, 52, 61]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp272.948
WipMemBlock7ca4ba97-d1e2-47f9-bab2-3f55d49c3dea||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5suma2412bf1ee66ef20a1ac7079e0e6b7cc
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.