MRIQC: individual bold report

Summary

  • BIDS filename: sub-08_ses-02_task-train_run-3_bold.
  • Date and time: 2021-02-08, 07:42.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.006790126050420168
aqi0.00459503525210084
dummy_trs0
dvarsnstd35.96000013860756
dvarsstd1.4030158970886069
dvarsvstd1.0844661970886074
efc0.6333573258200047
fber167.9911651611328
fdmean0.1444452171689211
fdnum28
fdperc11.764705882352942
fwhmavg2.8562672727272727
fwhmx2.611616
fwhmy3.005564
fwhmz2.9516218181818186
gcor0.0324542
gsrx0.029254687950015068
gsry0.09597920626401901
sizet238
sizex76
sizey76
sizez54
snr2.28352190819325
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk11.942759027414247
summarybgmad249.11144612143252
summarybgmean969.0886840820312
summarybgmedian429.62188720703125
summarybgn163396.0
summarybgp05237.19749450683594
summarybgp953796.3026733398438
summarybgstdv1326.5189208984375
summaryfgk0.9504289105926609
summaryfgmad2382.1305746794637
summaryfgmean6415.11669921875
summaryfgmedian5898.2734375
summaryfgn80361.0
summaryfgp053196.327880859375
summaryfgp9511415.5048828125
summaryfgstdv2582.9560546875
tsnr55.408989027142525
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:50:19.195000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997354, -0.0326564, -0.064955, 0.0308204, 0.999102, -0.0290711]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.138186
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber12
ShimSetting[-5646, -1556, 3216, 411, -80, 45, 10, 60]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp272.351
WipMemBlock41dee060-4df6-4606-b220-8f99fe639a09||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumbe20fb47a7549eae4f8704af7d434ccc
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.