MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-04_task-train_run-9_bold.
  • Date and time: 2021-02-08, 09:31.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0020022362869198313
aqi0.004747601729957806
dummy_trs1
dvarsnstd30.606828576355955
dvarsstd1.1918451191949155
dvarsvstd1.013126535805084
efc0.60237109063205
fber174.92428588867188
fdmean0.15085114704104932
fdnum51
fdperc21.518987341772153
fwhmavg2.8677008484848483
fwhmx2.656024
fwhmy3.032784
fwhmz2.9142945454545455
gcor0.0269237
gsrx0.019956357777118683
gsry0.08367927372455597
sizet237
sizex76
sizey76
sizez54
snr1.9785885477125817
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk24.24276514989665
summarybgmad279.4485741552257
summarybgmean888.199951171875
summarybgmedian449.8396301269531
summarybgn169849.0
summarybgp05230.5653839111328
summarybgp953039.9905273437507
summarybgstdv1169.2235107421875
summaryfgk2.0595886646778707
summaryfgmad2645.96934008252
summaryfgmean6931.48779296875
summaryfgmedian6194.52734375
summaryfgn78391.0
summaryfgp053284.525146484375
summaryfgp9513078.3603515625
summaryfgstdv3130.760986328125
tsnr55.07802523323335
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:38:7.125000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.996002, -0.0817429, 0.0360191, 0.0853875, 0.989672, -0.115147]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.140668
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber18
ShimSetting[-5614, -1551, 3215, 345, -15, -124, -67, -23]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp281.193
WipMemBlockfdd411b7-597b-46ef-832b-5d5664b44d6e||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumc4297a35393d03dab57832dfba335e76
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.