MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-04_task-train_run-10_bold.
  • Date and time: 2021-02-08, 09:31.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.003386244725738397
aqi0.004771098607594936
dummy_trs1
dvarsnstd29.500022896440672
dvarsstd1.1654356377966104
dvarsvstd1.0145173555084745
efc0.6020809583791592
fber174.36817932128906
fdmean0.13690464253021234
fdnum35
fdperc14.767932489451477
fwhmavg2.8917193939393937
fwhmx2.673676
fwhmy3.053184
fwhmz2.9482981818181817
gcor0.0234832
gsrx0.020007679238915443
gsry0.08377964794635773
sizet237
sizex76
sizey76
sizez54
snr1.9606332099644015
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk23.666557644011622
summarybgmad283.4335200717498
summarybgmean894.6763916015625
summarybgmedian452.45989990234375
summarybgn169563.0
summarybgp05228.2409164428711
summarybgp953050.7360839843723
summarybgstdv1181.2347412109375
summaryfgk2.1282480150702323
summaryfgmad2665.318457317001
summaryfgmean6978.654296875
summaryfgmedian6220.27392578125
summaryfgn78429.0
summaryfgp053284.9415527343754
summaryfgp9513213.676171874991
summaryfgstdv3172.56396484375
tsnr51.905446300748736
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:45:55.875000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.996002, -0.0817429, 0.0360191, 0.0853875, 0.989672, -0.115147]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.140668
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber19
ShimSetting[-5614, -1551, 3215, 345, -15, -124, -67, -23]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.3225, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.835]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp281.193
WipMemBlockb511db05-7890-4ec2-af1c-7b431dfe2fd5||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumfe14a7f57f5991320ccec359f9b1f1ed
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.