MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-04_task-test_run-2_bold.
  • Date and time: 2021-02-08, 10:03.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.002661194029850746
aqi0.006790951604477612
dummy_trs0
dvarsnstd29.933650470187235
dvarsstd1.1649963785393267
dvarsvstd1.0089820259925093
efc0.6015866001121447
fber181.25289916992188
fdmean0.1703184620127326
fdnum70
fdperc26.119402985074625
fwhmavg2.819375515151515
fwhmx2.60282
fwhmy2.993212
fwhmz2.8620945454545454
gcor0.0347965
gsrx0.020458977669477463
gsry0.08719789236783981
sizet268
sizex76
sizey76
sizez54
snr2.014363992145686
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk26.93529127717341
summarybgmad261.5520387970875
summarybgmean867.2850952148438
summarybgmedian438.84326171875
summarybgn170520.0
summarybgp05234.44384384155273
summarybgp952943.0384643554685
summarybgstdv1162.111083984375
summaryfgk2.0448244414800705
summaryfgmad2580.0710015335226
summaryfgmean6865.33056640625
summaryfgmedian6144.67529296875
summaryfgn77969.0
summaryfgp053308.837255859375
summaryfgp9512850.805273437489
summaryfgstdv3050.409912109375
tsnr50.69103791192174
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:57:48.447500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.996002, -0.0817429, 0.0360191, 0.0853875, 0.989672, -0.115147]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.140721
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber13
ShimSetting[-5614, -1551, 3215, 345, -15, -124, -67, -23]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp281.193
WipMemBlock6305b964-aa8d-464b-818d-742a1d103c53||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5suma09e9d1f05fc08caeac7e3b94b70f1a9
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.