MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-04_task-test_run-1_bold.
  • Date and time: 2021-02-08, 10:03.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0031952059925093633
aqi0.006423500149812735
dummy_trs1
dvarsnstd27.7562870443233
dvarsstd1.1727967377819541
dvarsvstd1.0156894610150384
efc0.6014407046414796
fber187.5026092529297
fdmean0.11758539902086265
fdnum30
fdperc11.235955056179776
fwhmavg2.8017362424242425
fwhmx2.598472
fwhmy2.971984
fwhmz2.8347527272727273
gcor0.030387
gsrx0.020005039870738983
gsry0.08821384608745575
sizet267
sizex76
sizey76
sizez54
snr2.0283298080865024
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk29.391631972294796
summarybgmad255.58784289893583
summarybgmean849.5269775390625
summarybgmedian428.1086120605469
summarybgn170606.0
summarybgp05228.2546844482422
summarybgp952870.2219848632812
summarybgstdv1145.600341796875
summaryfgk2.020692555594845
summaryfgmad2531.940000020064
summaryfgmean6791.8505859375
summaryfgmedian6079.5732421875
summaryfgn78112.0
summaryfgp053296.0838989257813
summaryfgp9512679.128466796876
summaryfgstdv2997.310546875
tsnr52.45945489720907
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:41:34.405000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.996002, -0.0817429, 0.0360191, 0.0853875, 0.989672, -0.115147]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.140721
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber11
ShimSetting[-5614, -1551, 3215, 345, -15, -124, -67, -23]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.215, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp281.193
WipMemBlock679e192f-6342-43cd-8fdb-c62b30c73427||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum088370493d341dc8ebdc795d25c48ce4
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.