MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-03_task-train_run-4_bold.
  • Date and time: 2021-02-08, 10:27.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0031911764705882346
aqi0.006515537142857144
dummy_trs0
dvarsnstd29.292469789282702
dvarsstd1.1169806973839662
dvarsvstd1.001130327510549
efc0.6069906761603299
fber195.1717071533203
fdmean0.20392700740067374
fdnum86
fdperc36.134453781512605
fwhmavg2.755269696969697
fwhmx2.497248
fwhmy2.895572
fwhmz2.872989090909091
gcor0.0343061
gsrx0.016148006543517113
gsry0.09242561459541321
sizet238
sizex76
sizey76
sizez54
snr2.217132106098564
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk37.426878520368774
summarybgmad215.97403323944815
summarybgmean726.3192749023438
summarybgmedian383.8403625488281
summarybgn169899.0
summarybgp05214.47900390625
summarybgp952344.3367431640636
summarybgstdv975.968994140625
summaryfgk1.9777876989716354
summaryfgmad2104.790573253395
summaryfgmean6064.1181640625
summaryfgmedian5505.1513671875
summaryfgn79691.0
summaryfgp053133.1136474609375
summaryfgp9510926.73388671875
summaryfgstdv2482.989990234375
tsnr48.41910005360842
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime10:23:36.005000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.992805, -0.083148, 0.0861685, 0.0952464, 0.984476, -0.147431]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.11985
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber19
ShimSetting[-5610, -1554, 3199, 385, -52, -124, -119, -17]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp265.67
WipMemBlockbab1ac04-63df-4f4a-935e-3795ddad071f||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum57f39dd5b55f11b97bf22206fe38d4b9
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.