MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-02_task-train_run-6_bold.
  • Date and time: 2021-02-08, 10:27.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0012569747899159663
aqi0.004553609957983193
dummy_trs0
dvarsnstd26.11132988725738
dvarsstd1.1185252860337562
dvarsvstd0.9916389271729962
efc0.5985192014032243
fber196.6686248779297
fdmean0.14116985175352237
fdnum50
fdperc21.008403361344538
fwhmavg2.8254287272727274
fwhmx2.603096
fwhmy3.020132
fwhmz2.8530581818181817
gcor0.0332326
gsrx0.01818436197936535
gsry0.08324374258518219
sizet238
sizex76
sizey76
sizez54
snr2.028478154801392
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk25.970463464832772
summarybgmad248.111635253408
summarybgmean825.0894775390625
summarybgmedian424.2857360839844
summarybgn170324.0
summarybgp05229.63930130004883
summarybgp952757.911303710938
summarybgstdv1091.82275390625
summaryfgk2.1403032844993994
summaryfgmad2556.95637871332
summaryfgmean6875.97900390625
summaryfgmedian6159.720703125
summaryfgn78402.0
summaryfgp053329.689416503906
summaryfgp9512770.025390625
summaryfgstdv3036.602294921875
tsnr54.865444670431316
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime12:33:48.435000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.996325, -0.0674805, 0.0527588, 0.0722914, 0.992817, -0.095338]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.137389
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber13
ShimSetting[-5603, -1563, 3233, 378, 31, -143, -43, -20]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp276.697
WipMemBlock868a851d-785b-40de-b8ac-000537c11849||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum25fd8ab9ea0055afe9896f807581d971
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.