MRIQC: individual bold report

Summary

  • BIDS filename: sub-07_ses-01_task-rest_run-2_bold.
  • Date and time: 2021-02-08, 11:12.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0020886792452830187
aqi0.0035981992924528305
dummy_trs0
dvarsnstd26.593946836777274
dvarsstd1.1840461636966824
dvarsvstd1.0240823196208533
efc0.5995957593125332
fber191.49378967285156
fdmean0.14465337074239376
fdnum44
fdperc20.754716981132077
fwhmavg2.7929894545454546
fwhmx2.5832159999999997
fwhmy2.9641960000000003
fwhmz2.8315563636363636
gcor0.0356183
gsrx0.018130803480744362
gsry0.09939006716012955
sizet212
sizex76
sizey76
sizez54
snr2.021590219510816
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk40.29194605629721
summarybgmad244.26222201954786
summarybgmean821.5408935546875
summarybgmedian414.72406005859375
summarybgn170390.0
summarybgp05225.0
summarybgp952751.8371215820302
summarybgstdv1147.570068359375
summaryfgk2.0351232160801676
summaryfgmad2464.420789221441
summaryfgmean6626.09326171875
summaryfgmedian5923.7548828125
summaryfgn78935.0
summaryfgp053220.997241210938
summaryfgp9512346.5576171875
summaryfgstdv2930.2265625
tsnr60.28416252369061
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime09:29:29.600000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.995725, -0.0684681, 0.0619939, 0.074869, 0.991369, -0.10762]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_rs_fMRI
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.146072
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_rs_fMRI
SeriesNumber10
ShimSetting[-5620, -1558, 3216, 368, -41, -151, -73, -46]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNamerest
TotalReadoutTime0.0382497
TxRefAmp285.858
WipMemBlock2c1ee726-5108-48ef-bf58-21bc3953ac33||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum6dbe7ccc2c9c3ef25e657805cd4d1f10
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.