MRIQC: individual T2w report

cjv			0.5476175710433712
cnr			2.3860347658306544
efc			0.43844601348964357
fber			3765.019668352171
fwhm	avg		2.848871106526642
fwhm	x		2.7304
fwhm	y		3.2707
fwhm	z		2.545513319579926
icvs	csf		0.22792878144358775
icvs	gm		0.39197628042733584
icvs	wm		0.3800949381290764
inu	med		1.5337263345718384
inu	range		0.1818384408950806
qi	1		0.00015334852944236997
qi	2		0.004492242416335355
rpve	csf		20.094789224768288
rpve	gm		11.199837532666377
rpve	wm		13.04961397122388
size	x		256
size	y		256
size	z		128
snr	csf		5.854836983237269
snr	gm		6.986660759372194
snr	total		6.527529907599802
snr	wm		6.741091980189939
snrd	csf		285.36789392910424
snrd	gm		87.78171213663575
snrd	total		141.86136518964153
snrd	wm		52.43448950318463
spacing	x		1.0
spacing	y		1.0
spacing	z		1.2099995613098145
summary	bg	k	498.19564351853774
summary	bg	mad	12.494378422433696
summary	bg	mean	21.186732900427387
summary	bg	median	16.98431159555912
summary	bg	n	2514635.0
summary	bg	p05	4.278490707278252
summary	bg	p95	50.30467861890793
summary	bg	stdv	20.1441623241554
summary	csf	k	4.632906988849048
summary	csf	mad	563.9770198680071
summary	csf	mean	5372.271910908793
summary	csf	median	5442.36983089149
summary	csf	n	57050.0
summary	csf	p05	3578.827825404704
summary	csf	p95	6681.7772806115445
summary	csf	stdv	929.5428972691257
summary	gm	k	0.3144409381355695
summary	gm	mad	231.7226644345203
summary	gm	mean	1675.9878533634958
summary	gm	median	1674.1215532645583
summary	gm	n	10140.0
summary	gm	p05	1292.5968682855369
summary	gm	p95	2078.315756430477
summary	gm	stdv	239.60502141328652
summary	wm	k	0.5807800101781861
summary	wm	mad	137.43816264677065
summary	wm	mean	990.2028484698824
summary	wm	median	999.9999644011259
summary	wm	n	105183.0
summary	wm	p05	728.5102813392878
summary	wm	p95	1215.609965801239
summary	wm	stdv	148.3432081491846
tpm	overlap	csf	0.15122734010219574
tpm	overlap	gm	0.3876344859600067
tpm	overlap	wm	0.4393954277038574
wm2max			0.14758050628551747

AcquisitionMatrixPE	256
AcquisitionNumber	1
AcquisitionTime	09:24:58.042500
BaseResolution	256
BodyPartExamined	BRAIN
ConsistencyInfo	N4_VE11C_LATEST_20160120
ConversionSoftware	dcm2niix
ConversionSoftwareVersion	v1.0.20201102
DeviceSerialNumber	167012
DwellTime	5.4e-06
EchoTime	0.12
EchoTrainLength	28
FlipAngle	90
ImageOrientationPatientDICOM	[0.995103, -0.0777934, 0.0609725, 0.076569, 0.996818, 0.0221703]
ImageType	['ORIGINAL', 'PRIMARY', 'M', 'NORM', 'DIS2D']
ImagingFrequency	123.253
InPlanePhaseEncodingDirectionDICOM	COL
InstitutionAddress	Vassar Street 43,Cambridge,Boston,US,02139
InstitutionName	McGovern Institute for Brain Research (3T1)
InstitutionalDepartmentName	Department
MRAcquisitionType	2D
MagneticFieldStrength	3
Manufacturer	Siemens
ManufacturersModelName	Prisma_fit
Modality	MR
ParallelReductionFactorInPlane	2
PartialFourier	1
PatientPosition	HFS
PercentPhaseFOV	100
PercentSampling	100
PhaseEncodingDirection	j-
PhaseEncodingSteps	255
PhaseResolution	1
PixelBandwidth	360
ProcedureStepDescription	Oliva^Alex Ben
ProtocolName	t2w_1x1x1
PulseSequenceDetails	%SiemensSeq%\tse
ReceiveCoilActiveElements	HEA;HEP
ReceiveCoilName	Head_32
ReconMatrixPE	256
RefLinesPE	24
RepetitionTime	7.97
SAR	0.533768
ScanningSequence	SE
SequenceName	*tseR2d1_28
SequenceVariant	SK\SP
SeriesDescription	t2w_1x1x1
SeriesNumber	9
ShimSetting	[-5620, -1568, 3205, 331, -45, -188, -31, -59]
SliceThickness	1.1
SliceTiming	[0, 47.8203, 95.6406, 103.461, 151.281, 0.3125, 48.1328, 95.9531, 103.781, 151.602, 0.61719, 48.4375, 96.2578, 104.102, 151.922, 0.92188, 48.7422, 96.5625, 104.422, 152.242, 1.23438, 49.0547, 96.8672, 104.742, 152.555, 1.53906, 49.3594, 97.1797, 105.055, 152.875, 1.84375, 49.6641, 97.4844, 105.375, 153.195, 2.14844, 49.9688, 97.7891, 105.695, 153.516, 2.45312, 50.2734, 98.0938, 106.016, 153.836, 2.76562, 50.5859, 98.4062, 106.336, 154.156, 3.07031, 50.8906, 98.7109, 106.648, 154.469, 3.375, 51.1953, 99.0156, 106.969, 154.789, 3.67969, 51.5, 99.3203, 107.289, 155.109, 3.99219, 51.8047, 99.625, 107.609, 155.43, 4.29688, 52.1172, 99.9375, 107.93, 155.742, 4.60156, 52.4219, 60.2422, 108.242, 156.062, 4.90625, 52.7266, 60.5469, 108.562, 156.383, 5.21875, 53.0391, 60.8594, 108.883, 156.703, 5.52344, 53.3438, 61.1641, 109.203, 157.023, 5.82812, 53.6484, 61.4688, 109.523, 157.344, 6.13281, 53.9531, 61.7734, 109.844, 157.664, 6.4375, 54.2578, 62.0781, 110.156, 157.977, 6.75, 54.5703, 62.3906, 110.477, 158.297, 7.05469, 54.875, 62.6953, 110.797, 158.617, 7.35938, 55.1797, 63, 111.117, 158.938, 7.66406, 55.4844, 63.3047]
SoftwareVersions	syngo MR E11
SpacingBetweenSlices	1.21
StationName	MRC35115
TxRefAmp	285.858

md5sum	7e865f7fe645a053f1b1d197760c9ded
software	mriqc
version	0.16.1

MRIQC: individual T2w report

Summary

Visual reports

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