MRIQC: individual bold report

Summary

  • BIDS filename: sub-06_ses-03_task-train_run-7_bold.
  • Date and time: 2021-02-08, 12:44.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0010069327731092436
aqi0.0025830700000000002
dummy_trs0
dvarsnstd22.98306014476793
dvarsstd1.151711964599156
dvarsvstd1.0084199091983126
efc0.56247299890628
fber400.1556396484375
fdmean0.11581776487476902
fdnum17
fdperc7.142857142857143
fwhmavg2.596700606060606
fwhmx2.466824
fwhmy2.734256
fwhmz2.589021818181818
gcor0.0105747
gsrx-0.013223372399806976
gsry0.07510088384151459
sizet238
sizex76
sizey76
sizez54
snr2.841579033507977
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk35.52970247244215
summarybgmad101.06926199337533
summarybgmean577.3257446289062
summarybgmedian290.10296630859375
summarybgn190668.0
summarybgp05211.46640014648438
summarybgp951954.713330078124
summarybgstdv805.9525756835938
summaryfgk0.8363122241067469
summaryfgmad1998.7287722616777
summaryfgmean6293.69384765625
summaryfgmedian5938.8154296875
summaryfgn63097.0
summaryfgp053569.837158203125
summaryfgp9510160.91796875
summaryfgstdv2089.95361328125
tsnr70.3619646045845
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:00:7.445000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997529, 0.0652689, -0.0259853, -0.0688793, 0.981427, -0.179042]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0886261
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber17
ShimSetting[-5617, -1542, 3171, 466, 19, 65, 16, -13]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp216.337
WipMemBlock2d549cb0-fb3e-4b37-8575-bf3555e62da1||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum8688a8c3971c6aa113cf466e28cf5c09
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.