MRIQC: individual bold report

Summary

  • BIDS filename: sub-06_ses-03_task-test_run-2_bold.
  • Date and time: 2021-02-08, 13:13.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0003335227272727273
aqi0.004474065795454546
dummy_trs4
dvarsnstd23.735982488935353
dvarsstd1.0636310516349814
dvarsvstd0.9342801300000007
efc0.5627163077667615
fber407.0098571777344
fdmean0.10889698624206177
fdnum17
fdperc6.4393939393939394
fwhmavg2.604569575757576
fwhmx2.461992
fwhmy2.7410039999999998
fwhmz2.6107127272727273
gcor0.0148824
gsrx-0.011629926040768623
gsry0.07724791765213013
sizet264
sizex76
sizey76
sizez54
snr2.8769105120840712
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk36.67995270513185
summarybgmad101.47963803469143
summarybgmean562.0405883789062
summarybgmedian284.8257751464844
summarybgn190573.0
summarybgp05204.3712158203125
summarybgp951870.5561279296871
summarybgstdv793.12646484375
summaryfgk0.827119560161548
summaryfgmad1929.539462186642
summaryfgmean6194.49365234375
summaryfgmedian5854.33740234375
summaryfgn63485.0
summaryfgp053528.75390625
summaryfgp959984.806054687495
summaryfgstdv2034.9229736328125
tsnr57.56090118736029
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:20:0.175000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997529, 0.0652689, -0.0259853, -0.0688793, 0.981427, -0.179042]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0886601
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber12
ShimSetting[-5617, -1542, 3171, 466, 19, 65, 16, -13]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp216.337
WipMemBlockd1592400-d148-4e4a-9e5e-5e17bac168b2||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumbad1ecd0f4d448b945fb7a1325e7dc93
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.