MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-05_task-train_run-7_bold.
  • Date and time: 2021-02-08, 15:12.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005560924369747899
aqi0.0030495239075630253
dummy_trs0
dvarsnstd22.237315310801694
dvarsstd1.1027160374683542
dvarsvstd1.0085551465400846
efc0.604452813735747
fber247.88720703125
fdmean0.08524790806676272
fdnum1
fdperc0.42016806722689076
fwhmavg2.7820123636363636
fwhmx2.579212
fwhmy2.899316
fwhmz2.867509090909091
gcor0.024881
gsrx0.05041070654988289
gsry0.09488847851753235
sizet238
sizex76
sizey76
sizez54
snr2.644104657578977
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk18.697115171862187
summarybgmad150.5588706270787
summarybgmean777.4279174804688
summarybgmedian327.63446044921875
summarybgn182214.0
summarybgp05212.8121971130371
summarybgp953072.4475585937503
summarybgstdv1161.0731201171875
summaryfgk0.9445877528356106
summaryfgmad1785.90965754317
summaryfgmean5616.8994140625
summaryfgmedian5247.306640625
summaryfgn69008.0
summaryfgp053089.365270996094
summaryfgp959485.228710937488
summaryfgstdv1984.5162353515625
tsnr70.39195844577625
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:19:5.240000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999707, -0.0138999, 0.0197951, 0.0151811, 0.997696, -0.0661171]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.108456
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber16
ShimSetting[-5599, -1515, 3191, 613, 30, -27, -116, -10]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp235.942
WipMemBlock4a9511f1-6402-417b-9137-6aca0ff12a6b||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sume741427c4be65f8f2149dd1ec55d3424
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.