MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-05_task-train_run-6_bold.
  • Date and time: 2021-02-08, 15:12.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007788655462184873
aqi0.0035235401260504205
dummy_trs0
dvarsnstd23.090985318185663
dvarsstd1.0989226567932484
dvarsvstd0.9990790003797471
efc0.6041429845576363
fber251.83163452148438
fdmean0.0781156446360611
fdnum2
fdperc0.8403361344537815
fwhmavg2.7522528484848485
fwhmx2.517976
fwhmy2.883648
fwhmz2.855134545454545
gcor0.0263079
gsrx0.020930852741003036
gsry0.1010391041636467
sizet238
sizex76
sizey76
sizez54
snr2.647928644503059
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk29.30158314679236
summarybgmad140.7693433746689
summarybgmean704.7940673828125
summarybgmedian322.25
summarybgn177010.0
summarybgp05212.72689819335938
summarybgp952585.983251953123
summarybgstdv1037.3382568359375
summaryfgk0.9472540928076869
summaryfgmad1796.8796832844419
summaryfgmean5637.86669921875
summaryfgmedian5271.7060546875
summaryfgn70066.0
summaryfgp053094.2228393554688
summaryfgp959513.709716796875
summaryfgstdv1990.864990234375
tsnr65.60059705469757
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:11:23.182500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.999707, -0.0138999, 0.0197951, 0.0151811, 0.997696, -0.0661171]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.108456
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber15
ShimSetting[-5599, -1515, 3191, 613, 30, -27, -116, -10]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp235.942
WipMemBlockee43ba9e-314b-42c4-9ba9-a71fcaa72cf3||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumd9cd4ebd132a64425840f6f492ff9ee3
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.