MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-04_task-test_run-3_bold.
  • Date and time: 2021-02-08, 16:00.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0004837686567164179
aqi0.0021312196641791042
dummy_trs0
dvarsnstd22.852171644269657
dvarsstd1.1011942858801496
dvarsvstd0.9984487026966302
efc0.609254993216418
fber225.42367553710938
fdmean0.09743427173085221
fdnum10
fdperc3.7313432835820897
fwhmavg2.7933945454545452
fwhmx2.600068
fwhmy2.960112
fwhmz2.8200036363636367
gcor0.0161155
gsrx0.06777670979499817
gsry0.09023328125476837
sizet268
sizex76
sizey76
sizez54
snr2.6583291287619755
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk13.111791762096505
summarybgmad175.54728764519348
summarybgmean863.9639282226562
summarybgmedian348.84515380859375
summarybgn185940.0
summarybgp05214.9251823425293
summarybgp953584.8727416992183
summarybgstdv1266.113525390625
summaryfgk0.9263441187498009
summaryfgmad1819.8388428104918
summaryfgmean5621.58154296875
summaryfgmedian5257.7646484375
summaryfgn68426.0
summaryfgp053068.2144775390625
summaryfgp959372.494140625
summaryfgstdv1977.8311767578125
tsnr70.89785468019545
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:41:7.572500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.998054, -0.000207198, 0.0623601, -0.00104513, 0.999798, 0.020049]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMIT
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.120119
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber20
ShimSetting[-5596, -1531, 3193, 631, 77, -77, -49, -20]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp243.335
WipMemBlock3b15873a-0561-4127-9764-af7698f690ba||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum99e99e1995b4bec9033f8b762df8dec0
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.