MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-02_task-train_run-9_bold.
  • Date and time: 2021-02-08, 16:32.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007472995780590718
aqi0.0036125879746835444
dummy_trs1
dvarsnstd23.600118022881336
dvarsstd1.0833519755932208
dvarsvstd0.9945409989830506
efc0.59585417286494
fber250.55775451660156
fdmean0.101053827086643
fdnum12
fdperc5.063291139240507
fwhmavg2.807000199965282
fwhmx2.4773602362594827
fwhmy2.995804
fwhmz2.947836363636364
gcor0.0161411
gsrx0.043593887239694595
gsry0.12403199821710587
sizet237
sizex76
sizey76
sizez54
snr2.422821991498988
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk26.4796781328951
summarybgmad140.76590472206252
summarybgmean692.56298828125
summarybgmedian306.2742614746094
summarybgn183533.0
summarybgp05203.02529907226562
summarybgp952718.3416015625
summarybgstdv1012.9489135742188
summaryfgk1.5155773132150578
summaryfgmad1737.0089407910266
summaryfgmean5368.4052734375
summaryfgmedian4919.16845703125
summaryfgn68411.0
summaryfgp052902.7066650390625
summaryfgp959331.88330078125
summaryfgstdv2030.331787109375
tsnr63.39744631294161
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:38:8.950000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.989021, -0.117317, 0.0898595, 0.118984, 0.992806, -0.0134117]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.123937
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber18
ShimSetting[-5600, -1519, 3170, 611, 89, -33, -37, -73]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp247.256
WipMemBlock7125391d-1ec3-4f1c-811d-4bd33ccd7f95||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumddb73397c1adb9ad28963cd5c064fde9
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.