MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-02_task-train_run-7_bold.
  • Date and time: 2021-02-08, 16:48.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007208860759493671
aqi0.00417537611814346
dummy_trs1
dvarsnstd23.385386814491543
dvarsstd1.0667050232627113
dvarsvstd0.9833406028813554
efc0.594759645830869
fber253.5541534423828
fdmean0.08896339843040928
fdnum5
fdperc2.109704641350211
fwhmavg2.813131715068096
fwhmx2.47582823611338
fwhmy3.004996
fwhmz2.958570909090909
gcor0.0292886
gsrx0.04307069256901741
gsry0.12668921053409576
sizet237
sizex76
sizey76
sizez54
snr2.4064010293809224
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk27.08827244263708
summarybgmad137.93829163473623
summarybgmean690.019775390625
summarybgmedian303.8565368652344
summarybgn183940.0
summarybgp05202.39662170410156
summarybgp952712.422717285156
summarybgstdv1018.9631958007812
summaryfgk1.5930028856814138
summaryfgmad1730.4939609739167
summaryfgmean5361.994140625
summaryfgmedian4902.375
summaryfgn68380.0
summaryfgp052904.6822998046873
summaryfgp959369.786328124992
summaryfgstdv2037.2078857421875
tsnr61.34647205262445
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime17:22:28.020000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.989021, -0.117317, 0.0898595, 0.118984, 0.992806, -0.0134117]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.123937
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber16
ShimSetting[-5600, -1519, 3170, 611, 89, -33, -37, -73]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp247.256
WipMemBlockfb91332e-3156-47f1-9fc7-07a66c84adec||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb10c5e6c96fbf189380ed2290cff5b85
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.