MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-02_task-train_run-1_bold.
  • Date and time: 2021-02-08, 17:15.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.004430294117647059
aqi0.0052467282352941175
dummy_trs0
dvarsnstd23.84750420109706
dvarsstd1.1079625105907176
dvarsvstd1.00682801164557
efc0.6026058641582694
fber237.0999755859375
fdmean0.08282481484796046
fdnum4
fdperc1.680672268907563
fwhmavg2.7996335320925354
fwhmx2.4394202326412424
fwhmy2.994764
fwhmz2.9647163636363634
gcor0.00933016
gsrx0.014441711828112602
gsry0.11289480328559875
sizet238
sizex76
sizey76
sizez54
snr2.539360321012925
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk29.14438224574446
summarybgmad162.52560792448637
summarybgmean663.5367431640625
summarybgmedian326.4580078125
summarybgn175508.0
summarybgp05200.29412841796875
summarybgp952357.025793457031
summarybgstdv935.6927490234375
summaryfgk1.287892501951383
summaryfgmad1797.0355085420263
summaryfgmean5571.7060546875
summaryfgmedian5166.41015625
summaryfgn71112.0
summaryfgp053015.072900390625
summaryfgp959483.976757812496
summaryfgstdv2034.517822265625
tsnr50.493823683355004
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:07:33.200000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.989021, -0.117317, 0.0898595, 0.118984, 0.992806, -0.0134117]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.123937
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber7
ShimSetting[-5600, -1519, 3170, 611, 89, -33, -37, -73]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp247.256
WipMemBlocka9b4e48c-e264-4a9a-a40b-749a4fc6899e||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumdc3a9f9b03ab9f3a2d6eaa19dd49d7ad
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.