MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-02_task-test_run-2_bold.
  • Date and time: 2021-02-08, 17:15.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0008810112359550562
aqi0.003033602209737827
dummy_trs1
dvarsnstd24.88809403447368
dvarsstd1.11192767443609
dvarsvstd1.008381378571428
efc0.5968790349845484
fber251.33692932128906
fdmean0.11203699288860729
fdnum17
fdperc6.367041198501872
fwhmavg2.802517411677559
fwhmx2.4644962350326765
fwhmy2.973656
fwhmz2.9694000000000003
gcor0.0191966
gsrx0.02584872953593731
gsry0.12225771695375443
sizet267
sizex76
sizey76
sizez54
snr2.464638590826016
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk39.06772591124132
summarybgmad130.89099934507018
summarybgmean635.936279296875
summarybgmedian300.2584228515625
summarybgn178023.0
summarybgp05203.318359375
summarybgp952292.267138671875
summarybgstdv940.3916015625
summaryfgk1.477265194386395
summaryfgmad1697.85445141571
summaryfgmean5356.78955078125
summaryfgmedian4915.7001953125
summaryfgn69454.0
summaryfgp052920.9913330078125
summaryfgp959268.922412109372
summaryfgstdv1994.4769287109375
tsnr65.91120812343433
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:56:44.580000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.989021, -0.117317, 0.0898595, 0.118984, 0.992806, -0.0134117]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.123984
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber13
ShimSetting[-5600, -1519, 3170, 611, 89, -33, -37, -73]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.19, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.7025, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp247.256
WipMemBlock31cc259e-43fc-4a09-8439-6e5048644dbe||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumf5d2bf1104df281048a181dbca05421b
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.