MRIQC: individual bold report

Summary

  • BIDS filename: sub-05_ses-02_task-test_run-1_bold.
  • Date and time: 2021-02-08, 17:15.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0014112686567164178
aqi0.004537881194029851
dummy_trs0
dvarsnstd26.286540627752807
dvarsstd1.097139674719101
dvarsvstd0.9922143873782774
efc0.5994976202465244
fber241.73553466796875
fdmean0.1292774980486786
fdnum43
fdperc16.044776119402986
fwhmavg2.810906381459214
fwhmx2.4671602352867352
fwhmy2.9913879999999997
fwhmz2.9741709090909088
gcor0.0275146
gsrx0.02111274190247059
gsry0.11832115799188614
sizet268
sizex76
sizey76
sizez54
snr2.4773235814171928
spacingtr1.75
spacingx2.499999761581421
spacingy2.5
spacingz2.75
summarybgk38.36742838917756
summarybgmad143.3809208497268
summarybgmean655.7986450195312
summarybgmedian311.7779846191406
summarybgn176866.0
summarybgp05204.23880004882812
summarybgp952350.1679077148438
summarybgstdv961.109375
summaryfgk1.401883008219027
summaryfgmad1745.8384957756741
summaryfgmean5444.015625
summaryfgmedian5014.412109375
summaryfgn70026.0
summaryfgp052944.5073852539062
summaryfgp959392.0146484375
summaryfgstdv2024.1103515625
tsnr56.23838556674309
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime16:32:5.617500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.989021, -0.117317, 0.0898595, 0.118984, 0.992806, -0.0134117]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.123984
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber10
ShimSetting[-5600, -1519, 3170, 611, 89, -33, -37, -73]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp247.256
WipMemBlock81108df9-160f-4952-98a0-b31ad9a2a000||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumb408bbec6f3d4ee378663af5719b7812
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.