MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-05_task-train_run-5_bold.
  • Date and time: 2021-02-08, 18:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007867226890756303
aqi0.0024494867647058822
dummy_trs0
dvarsnstd25.460181578734176
dvarsstd1.1910961182278483
dvarsvstd1.005808487721519
efc0.5487015308005732
fber406.4671936035156
fdmean0.1043785799823431
fdnum10
fdperc4.201680672268908
fwhmavg2.5282636363636364
fwhmx2.33706
fwhmy2.68928
fwhmz2.558450909090909
gcor0.0230856
gsrx0.005202766973525286
gsry0.04679185524582863
sizet238
sizex76
sizey76
sizez54
snr3.0570680111851853
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk26.10896238308457
summarybgmad91.74691641843073
summarybgmean509.3973388671875
summarybgmedian276.9285888671875
summarybgn198696.0
summarybgp05204.42437744140625
summarybgp951667.9696350097656
summarybgstdv654.3408203125
summaryfgk1.3073704893799167
summaryfgmad1729.4620032285652
summaryfgmean5938.27099609375
summaryfgmedian5642.3447265625
summaryfgn58267.0
summaryfgp053512.347998046875
summaryfgp959389.4859375
summaryfgstdv1845.6561279296875
tsnr70.56803638720885
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:35:18.555000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997965, 0.0148143, -0.0620258, -0.0090575, 0.99571, 0.0920857]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0898437
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber13
ShimSetting[-5626, -1571, 3171, 552, -52, -124, -15, 25]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp217.807
WipMemBlockc88929bd-4957-4514-a9d8-b2417bff4e51||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum569ea1467fa1133bcfd60aa816802a54
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.