MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-05_task-train_run-2_bold.
  • Date and time: 2021-02-08, 18:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.00039962184873949575
aqi0.002561488109243697
dummy_trs0
dvarsnstd24.639317878649788
dvarsstd1.150608981012658
dvarsvstd0.9878621912236294
efc0.5477336169840572
fber415.7506103515625
fdmean0.10497088869837398
fdnum4
fdperc1.680672268907563
fwhmavg2.5084655757575756
fwhmx2.315852
fwhmy2.660072
fwhmz2.549472727272727
gcor0.0197363
gsrx0.0037371262442320585
gsry0.04699238762259483
sizet238
sizex76
sizey76
sizez54
snr3.135746621834475
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk31.218185843293178
summarybgmad86.09994753457642
summarybgmean481.6255798339844
summarybgmedian270.54412841796875
summarybgn197626.0
summarybgp05202.0252227783203
summarybgp951519.1786804199219
summarybgstdv609.8781127929688
summaryfgk1.09169491483755
summaryfgmad1682.0563764333401
summaryfgmean5869.451171875
summaryfgmedian5591.248046875
summaryfgn58255.0
summaryfgp053506.474560546875
summaryfgp959205.325390624997
summaryfgstdv1783.05224609375
tsnr68.7828400391154
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime13:54:55.240000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997965, 0.0148143, -0.0620258, -0.0090575, 0.99571, 0.0920857]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0898437
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber8
ShimSetting[-5626, -1571, 3171, 552, -52, -124, -15, 25]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.13, 1.025, 0.1925, 1.09, 0.2575, 1.155, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.3475, 0.5125, 1.41, 0.5775, 1.475, 0.6425, 1.5375, 0.705, 1.6025, 0.77, 1.6675, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp217.807
WipMemBlockabe0fa0f-c5f0-4225-b58e-50618e464f6e||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumd044af4a5d16c7de86128f8a267f7281
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.