MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-05_task-test_run-2_bold.
  • Date and time: 2021-02-08, 18:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0004957677902621723
aqi0.0022832968164794008
dummy_trs1
dvarsnstd24.758872576917273
dvarsstd1.175927454624061
dvarsvstd0.9977777769172934
efc0.5485587108147231
fber407.8097229003906
fdmean0.10077618448065158
fdnum3
fdperc1.1235955056179776
fwhmavg2.5166689696969695
fwhmx2.30534
fwhmy2.6801760000000003
fwhmz2.564490909090909
gcor0.012995
gsrx0.002172383712604642
gsry0.04642057418823242
sizet267
sizex76
sizey76
sizez54
snr3.0948414318323128
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk30.531071707591686
summarybgmad88.5341063710444
summarybgmean488.5652160644531
summarybgmedian274.0786437988281
summarybgn197234.0
summarybgp05203.7715301513672
summarybgp951545.9565490722653
summarybgstdv612.3555297851562
summaryfgk1.156841767443419
summaryfgmad1711.3283591995873
summaryfgmean5910.4580078125
summaryfgmedian5626.64404296875
summaryfgn58417.0
summaryfgp053514.61201171875
summaryfgp959323.4419921875
summaryfgstdv1818.0562744140625
tsnr71.35328742396086
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:18:52.840000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997965, 0.0148143, -0.0620258, -0.0090575, 0.99571, 0.0920857]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0898781
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber11
ShimSetting[-5626, -1571, 3171, 552, -52, -124, -15, 25]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.9625, 0.1275, 1.025, 0.1925, 1.09, 0.2575, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.45, 1.345, 0.5125, 1.41, 0.5775, 1.475, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp217.807
WipMemBlockf68283ab-8baa-49fb-aa07-ef6b82c62846||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum8def0a6d1deccc5537b12c128d4a1eb3
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.