MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-04_task-train_run-8_bold.
  • Date and time: 2021-02-08, 18:17.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007184322033898304
aqi0.0019491847881355933
dummy_trs2
dvarsnstd22.52499109659575
dvarsstd1.1184780604680842
dvarsvstd0.9989566455744683
efc0.5541817682929426
fber369.9551086425781
fdmean0.10093180047013682
fdnum2
fdperc0.847457627118644
fwhmavg2.526635272727273
fwhmx2.31034
fwhmy2.678904
fwhmz2.590661818181818
gcor0.0103905
gsrx0.001804022234864533
gsry0.05108246952295303
sizet236
sizex76
sizey76
sizez54
snr3.0981700865650064
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk27.681641135401165
summarybgmad99.86204607867022
summarybgmean497.5453796386719
summarybgmedian281.3644104003906
summarybgn197171.0
summarybgp05204.77117919921875
summarybgp951566.084716796875
summarybgstdv601.7296752929688
summaryfgk1.3945932892549218
summaryfgmad1648.1259242940055
summaryfgmean5788.82080078125
summaryfgmedian5499.40234375
summaryfgn58736.0
summaryfgp053475.5498046875
summaryfgp959136.256103515625
summaryfgstdv1775.033447265625
tsnr74.0596110036131
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:06:15.702500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990323, 0.0527608, -0.128364, -0.0460096, 0.997425, 0.0550045]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0892218
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber23
ShimSetting[-5651, -1576, 3150, 559, -117, -177, -79, 37]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp218.616
WipMemBlockf5fe775d-267b-47e6-8daa-219f600dd817||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum4ffd6f2eb805316116a14208e0f2e6fe
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.