MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-04_task-test_run-3_bold.
  • Date and time: 2021-02-08, 18:42.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0029136194029850747
aqi0.002344098768656716
dummy_trs0
dvarsnstd22.474634163333317
dvarsstd1.1323834197378269
dvarsvstd1.0248187390636703
efc0.5540029409455499
fber370.2668151855469
fdmean0.10191291585436918
fdnum3
fdperc1.1194029850746268
fwhmavg2.5267045596774036
fwhmx2.310176
fwhmy2.680632
fwhmz2.5893056790322113
gcor0.00797345
gsrx0.0018534489208832383
gsry0.05076133459806442
sizet268
sizex76
sizey76
sizez54
snr3.100364134133503
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.749999761581421
summarybgk27.592794243802953
summarybgmad99.38138126335362
summarybgmean495.9456481933594
summarybgmedian280.9720153808594
summarybgn197240.0
summarybgp05204.5895538330078
summarybgp951564.9437988281234
summarybgstdv597.7643432617188
summaryfgk1.359285453837475
summaryfgmad1646.435555065387
summaryfgmean5781.779296875
summaryfgmedian5493.65283203125
summaryfgn58725.0
summaryfgp053471.216259765625
summaryfgp959117.381640624999
summaryfgstdv1771.9228515625
tsnr69.97811036417261
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:57:33.877500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.990331, 0.0525867, -0.128373, -0.0458367, 0.997435, 0.0549821]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.089256
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber22
ShimSetting[-5651, -1576, 3150, 559, -117, -177, -79, 37]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp218.616
WipMemBlock533f0c89-3524-49ee-813d-c6fbd206f24e||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum9322ca300b163a5da0321c6e99a7573b
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.