MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-03_task-train_run-3_bold.
  • Date and time: 2021-02-08, 19:40.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0005349789029535865
aqi0.002926530843881857
dummy_trs1
dvarsnstd24.560206672118646
dvarsstd1.145107906525424
dvarsvstd0.989184993940678
efc0.5518846575841636
fber384.17584228515625
fdmean0.10441950379750786
fdnum3
fdperc1.2658227848101267
fwhmavg2.492975236084537
fwhmx2.282036
fwhmy2.653631746929956
fwhmz2.543257961323655
gcor0.0119344
gsrx0.0028132915031164885
gsry0.04785605147480965
sizet237
sizex76
sizey76
sizez54
snr3.149041002701931
spacingtr1.75
spacingx2.5
spacingy2.500000238418579
spacingz2.750000238418579
summarybgk31.553462162257155
summarybgmad92.55943383297917
summarybgmean478.59771728515625
summarybgmedian273.58648681640625
summarybgn197456.0
summarybgp05200.92404174804688
summarybgp951485.5863952636719
summarybgstdv587.3952026367188
summaryfgk1.4056298078679097
summaryfgmad1599.674223179571
summaryfgmean5704.0810546875
summaryfgmedian5429.5986328125
summaryfgn58374.0
summaryfgp053448.6394165039064
summaryfgp958929.752148437496
summaryfgstdv1724.1922607421875
tsnr66.14023321936838
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:07:11.460000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.994369, 0.019985, -0.104073, -0.0131905, 0.997761, 0.0655697]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMIT
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0880585
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber10
ShimSetting[-5637, -1573, 3161, 597, -70, -169, -70, 22]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.8975, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.41, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp217.606
WipMemBlockb1a7e7d0-13c4-4e88-89a7-a3dbe3aba406||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumf25b2967cd2f4ac29e216036f70d93ef
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.