MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-03_task-test_run-3_bold.
  • Date and time: 2021-02-08, 19:40.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0004297378277153558
aqi0.00207306531835206
dummy_trs1
dvarsnstd24.386429880112775
dvarsstd1.1552523312030079
dvarsvstd0.9976903398120295
efc0.5522651538010025
fber376.9091796875
fdmean0.10559491402821089
fdnum5
fdperc1.8726591760299625
fwhmavg2.5714159582140645
fwhmx2.34806
fwhmy2.740351738659693
fwhmz2.6258361359825018
gcor0.010832
gsrx0.0032194145023822784
gsry0.04704824090003967
sizet267
sizex76
sizey76
sizez54
snr3.04977919804628
spacingtr1.75
spacingx2.5
spacingy2.500000238418579
spacingz2.750000238418579
summarybgk29.387485002837792
summarybgmad94.39791397353237
summarybgmean496.08038330078125
summarybgmedian278.0337219238281
summarybgn197546.0
summarybgp05204.42697143554688
summarybgp951566.2837524414062
summarybgstdv612.543701171875
summaryfgk1.6987953322935692
summaryfgmad1641.7626071550092
summaryfgmean5775.369140625
summaryfgmedian5478.044921875
summaryfgn58353.0
summaryfgp053445.197802734375
summaryfgp959141.869335937496
summaryfgstdv1796.1949462890625
tsnr73.26332593569532
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:03:22.940000
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.994369, 0.019985, -0.104073, -0.0131905, 0.997761, 0.0655697]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMIT
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0880922
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber17
ShimSetting[-5637, -1573, 3161, 597, -70, -169, -70, 22]
SliceThickness2.5
SliceTiming[0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325, 0, 0.8975, 0.065, 0.96, 0.1275, 1.025, 0.1925, 1.09, 0.255, 1.1525, 0.32, 1.2175, 0.385, 1.2825, 0.4475, 1.345, 0.5125, 1.41, 0.5775, 1.4725, 0.64, 1.5375, 0.705, 1.6025, 0.77, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp217.606
WipMemBlocke333ae29-3f6e-4e38-bc60-5fb906073b40||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sumbcc042c0c9f0a1a7d3e66e0d1325b3c4
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.