MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-02_task-train_run-9_bold.
  • Date and time: 2021-02-08, 20:04.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0007085714285714286
aqi0.002242288067226891
dummy_trs0
dvarsnstd22.59012791261603
dvarsstd1.136352628776371
dvarsvstd1.0053681224050637
efc0.5528996366851529
fber382.9206237792969
fdmean0.10153468594479852
fdnum5
fdperc2.100840336134454
fwhmavg2.6103872727272726
fwhmx2.400048
fwhmy2.7495719999999997
fwhmz2.6815418181818185
gcor0.0198274
gsrx0.005695823114365339
gsry0.0452350452542305
sizet238
sizex76
sizey76
sizez54
snr3.0079128049650197
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk26.07249916261521
summarybgmad94.27916734503908
summarybgmean519.835205078125
summarybgmedian280.06512451171875
summarybgn198132.0
summarybgp05206.80064086914064
summarybgp951712.4645935058552
summarybgstdv656.599853515625
summaryfgk1.6140643187694454
summaryfgmad1675.6648261466282
summaryfgmean5847.77392578125
summaryfgmedian5538.798828125
summaryfgn58663.0
summaryfgp053470.0809082031246
summaryfgp959352.987499999997
summaryfgstdv1841.3936767578125
tsnr71.59448859014083
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime15:48:51.862500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997093, -0.0366614, -0.0667923, 0.0379559, 0.999113, 0.0182164]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TRAIN
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0910922
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TRAIN
SeriesNumber18
ShimSetting[-5637, -1552, 3155, 552, -86, -169, -43, -17]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametrain
TotalReadoutTime0.0382497
TxRefAmp219.562
WipMemBlockd3d4abb7-71d2-48f8-916a-3be8f0efdcd1||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5sum36532a21c25c84c7f12d0424b9b6d73e
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.