MRIQC: individual bold report

Summary

  • BIDS filename: sub-04_ses-02_task-test_run-2_bold.
  • Date and time: 2021-02-08, 20:04.
  • MRIQC version: 0.16.1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.00047284644194756564
aqi0.004021706292134831
dummy_trs1
dvarsnstd24.889459602894746
dvarsstd1.1039912499248117
dvarsvstd0.9563745085714286
efc0.5517681347212828
fber394.5480651855469
fdmean0.11052529622621686
fdnum10
fdperc3.745318352059925
fwhmavg2.547697696969697
fwhmx2.339064
fwhmy2.67808
fwhmz2.625949090909091
gcor0.0166343
gsrx0.003984803333878517
gsry0.04907898232340813
sizet267
sizex76
sizey76
sizez54
snr3.1054962894323745
spacingtr1.75
spacingx2.5
spacingy2.5
spacingz2.75
summarybgk29.713874723700535
summarybgmad86.16306490807541
summarybgmean480.38275146484375
summarybgmedian268.11236572265625
summarybgn197513.0
summarybgp05200.4756622314453
summarybgp951515.5865234374983
summarybgstdv595.4109497070312
summaryfgk1.4409375742456803
summaryfgmad1595.6354352024996
summaryfgmean5681.11328125
summaryfgmedian5389.55810546875
summaryfgn58747.0
summaryfgp053433.866650390625
summaryfgp958954.306835937497
summaryfgstdv1735.475341796875
tsnr58.43694120179862
AcquisitionMatrixPE76
AcquisitionNumber1
AcquisitionTime14:43:56.717500
BandwidthPerPixelPhaseEncode25.8
BaseResolution76
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DerivedVendorReportedEchoSpacing0.000509996
DeviceSerialNumber167012
DwellTime2.9e-06
EchoTime0.03
EchoTrainLength76
EffectiveEchoSpacing0.000509996
FlipAngle71
ImageCommentsUnaliased MB2/PE2/LB
ImageOrientationPatientDICOM[0.997093, -0.0366614, -0.0667923, 0.0379559, 0.999113, 0.0182164]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'MB', 'ND', 'MOSAIC']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMcGovern Institute for Brain Research (3T1)
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
MultibandAccelerationFactor2
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps76
PhaseResolution1
PixelBandwidth2270
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamecmrr_run_fMRI_TEST
PulseSequenceDetails%CustomerSeq%\cmrr_mbep2d_bold
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE76
RepetitionTime1.75
SAR0.0911271
ScanOptionsFS
ScanningSequenceEP
SequenceNameepfid2d1_76
SequenceVariantSK\SS
SeriesDescriptioncmrr_run_fMRI_TEST
SeriesNumber10
ShimSetting[-5637, -1552, 3155, 552, -86, -169, -43, -17]
SliceThickness2.5
SliceTiming[0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325, 0, 0.895, 0.0625, 0.96, 0.1275, 1.025, 0.1925, 1.0875, 0.255, 1.1525, 0.32, 1.2175, 0.3825, 1.28, 0.4475, 1.345, 0.5125, 1.4075, 0.575, 1.4725, 0.64, 1.5375, 0.705, 1.6, 0.7675, 1.665, 0.8325]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices2.75
StationNameMRC35115
TaskNametest
TotalReadoutTime0.0382497
TxRefAmp219.562
WipMemBlock7f7004f5-e5f2-4ec9-be4b-47e994dec3e1||Sequence: R016 ve11c/master r/e634e98; Dec 19 2017 11:00:25 by eja
md5suma99d877a2ead8ea4f4cd20a5e8cfde6a
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.