MRIQC: individual T1w report

Summary

  • BIDS filename: sub-04_ses-01_T1w.
  • Date and time: 2021-02-09, 04:51.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.33832455367253156
cnr3.8921073133254547
efc0.5127027256328093
fber8206.764605830465
fwhmavg3.7431099999999997
fwhmx3.71988
fwhmy3.69507
fwhmz3.81438
icvscsf0.20499054062607253
icvsgm0.4200372651659422
icvswm0.3749721942079853
inumed1.3114233016967773
inurange0.24157225489616385
qi10.045397519688953815
qi20.008082278894838785
rpvecsf29.364451926846705
rpvegm15.350187200344772
rpvewm20.750083658168204
sizex176
sizey256
sizez256
snrcsf2.9546879430550317
snrgm14.222552353707048
snrtotal15.744465197912376
snrwm30.056155296975053
snrdcsf37.82292787179091
snrdgm81.38473832217653
snrdtotal75.67195852334152
snrdwm107.80820937605709
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk27.06724787327986
summarybgmad6.0768690844654545
summarybgmean5.312329898217701
summarybgmedian4.098785910755396
summarybgn2105824.0
summarybgp050.0
summarybgp9516.395143643021584
summarybgstdv6.441237221592784
summarycsfk17.071906347700672
summarycsfmad91.61457062782729
summarycsfmean385.01626109983766
summarycsfmedian350.8353206142783
summarycsfn19247.0
summarycsfp05254.5916767604649
summarycsfp95590.8529598768802
summarycsfstdv118.73545133400933
summarygmk0.026070620426268398
summarygmmad52.76876192333293
summarygmmean755.5120155460879
summarygmmedian754.9029747024179
summarygmn21504.0
summarygmp05668.2136526899412
summarygmp95843.4678803943098
summarygmstdv53.076649191174454
summarywmk0.8692098001257742
summarywmmad30.153578241904533
summarywmmean999.3331741107243
summarywmmedian999.9999954923987
summarywmn193209.0
summarywmp05943.1358264014125
summarywmp951052.2984283789992
summarywmstdv33.27096888265477
tpmoverlapcsf0.16811171174049377
tpmoverlapgm0.4432196021080017
tpmoverlapwm0.5109060406684875
wm2max0.4284539290874736
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime14:10:12.020000
BaseResolution256
BodyPartExaminedBRAIN
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20201102
DeviceSerialNumber167012
DwellTime1.15e-05
EchoTime0.00252
FlipAngle9
ImageOrientationPatientDICOM[0.0107415, 0.967766, 0.251623, -0.0586573, 0.251814, -0.965996]
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM']
ImagingFrequency123.253
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressVassar Street 43,Cambridge,Boston,US,02139
InstitutionNameMIT
InstitutionalDepartmentNameDepartment
InversionTime0.9
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
ModalityMR
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps256
PhaseResolution1
PixelBandwidth170
ProcedureStepDescriptionOliva^Alex Ben
ProtocolNamet1w_mpr_sag_1x1x1_176
PulseSequenceDetails%SiemensSeq%\tfl
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE256
RepetitionTime1.9
SAR0.0576257
ScanOptionsIR
ScanningSequenceGR\IR
SequenceName*tfl3d1_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiont1w_mpr_sag_1x1x1_176
SeriesNumber9
ShimSetting[-5637, -1590, 3090, -92, 17, -169, 14, 11]
SliceThickness1
SoftwareVersionssyngo MR E11
StationNameMRC35115
TxRefAmp218.397
md5sumb61cffd5a053ab9efd4c0849f158df69
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.